PhyloFunDB

Project 2020–Present
Pipeline for analyses of functional genes.

Details

Department
Microbial Ecology
Research group
Bodelier Group
Kuramae Group

This project aims at creating and maintaining phylogenetically validated reference databases of various microbial functional genes and creating the tools to make the databases available for the scientific community.

Workflow of PhyloFunDB
Ohana Costa
Workflow of the database-producing PhyloFunDb pipeline. Sequence download, processing, fil-tering, clustering and tree inference.

Publications

Details

Department
Microbial Ecology
Research group
Bodelier Group
Kuramae Group

Experts

This pipeline enables the easy update of functional gene reference databases facilitating taxonomic annotation of sequences retrieved from environmental samples.

Questions?

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