Publications

Theses

Lessons from the Amazon biome: impact of management practices on aboveground-belowground interactions

Thesis

Wednesday, 9 March, 2022

Linking microbial inoculants and associated changes in the soil microbiome to plant-soil performance in degraded lands

Thesis

Wednesday, 22 December, 2021

more theses

Recent scientific publications (2017 - )

For more information, please contact the NIOO library

Brown, J. M., Bouten, W., Camphuysen, K. C. J., Nolet, B. A., & Shamoun-Baranes, J. (2022). Acceleration as a proxy for energy expenditure in a facultative-soaring bird. Functional Ecology, In press. https://doi.org/10.1111/1365-2435.14055

Lammers, A., Lalk, M., & Garbeva, P. (2022). Air Ambulance: The Antimicrobial Power of Bacterial Volatiles. Antibiotics, 11, [109]. https://doi.org/10.3390/antibiotics11010109

Lourenço, K. S., Costa, O. Y. D. A., Cantarella, H., & Kuramae, E. E. (2022). Ammonia-oxidizing bacteria and fungal denitrifier diversity are associated with N₂O production in tropical soils. Soil Biology and Biochemistry, 166, [108563]. https://doi.org/10.1016/j.soilbio.2022.108563

Tennyson, A. J. D., & Tomotani, B. M. (2022). A new fossil species of kiwi (Aves: Apterygidae) from the mid-Pleistocene of New Zealand. Historical Biology, 34. https://doi.org/10.1080/08912963.2021.1916011

Cuenca-Cambronero, M., Courtney-Mustaphi, C. J., Greenway, R., Heiri, O., Hudson, C. M., King, L., Lemmen, K. D., Moosmann, M., Muschick, M., Ngoepe, N., Seehausen, O., & Matthews, B. (2022). An integrative paleolimnological approach for studying evolutionary processes. Trends in Ecology and Evolution, In press. https://doi.org/10.1016/j.tree.2022.01.007

Navarro-Ramos, M. J., Green, A. J., Lovas-Kiss, A., Roman, J., Brides, K., & van Leeuwen, C. H. A. (2022). A predatory waterbird as a vector of plant seeds and aquatic invertebrates. Freshwater Biology, 67(4), 657-671. https://doi.org/10.1111/fwb.13870

Liu, X., Raaijmakers, C. E., Vrieling, K., Lommen, S. T. E., & Bezemer, T. M. (2022). Associational resistance to nematodes and its effects on interspecific interactions among grassland plants. Plant and Soil, 471, 591–607. https://doi.org/10.1007/s11104-021-05238-8

Zhang, J., Klinkhamer, P. G. L., Vrieling, K., & Martijn Bezemer, T. (2022). Belowground responses of bacterial communities to foliar SA application over four plant generations. Plant and Soil, 470, 65–79. https://doi.org/10.1007/s11104-021-05158-7

Nazari, M., Bickel, S., Benard, P., Mason-Jones, K., Carminati, A., & Dippold, M. A. (2022). Biogels in Soils: Plant Mucilage as a Biofilm Matrix That Shapes the Rhizosphere Microbial Habitat. Frontiers in Plant Science, 12, [798992]. https://doi.org/10.3389/fpls.2021.798992

Avalos Garcia, M., Garbeva, P., Vader, L., van Wezel, G., Dickschat, J. S., & Ulanova, D. (2022). Biosynthesis, Evolution and Ecology of Microbial Terpenoids. Natural Product Reports, 39(2), 249-272. https://doi.org/10.1039/D1NP00047K

Tian, L., Chang, J., Shi, S., Ji, L., Zhang, J., Sun, Y., Li, X., Li, X., Xie, H., Cai, Y., Chen, D., Wang, J., van Veen, J. A., Kuramae, E., Phan Tran, L-S., & Tian, C. (2022). Comparison of methane metabolism in the rhizomicrobiomes of wild and related cultivated rice accessions reveals a strong impact of crop domestication. Science of the Total Environment, 803, [150131]. https://doi.org/10.1016/j.scitotenv.2021.150131

Geisen, S., Heinen, R., Andreou, E., van Lent, T., ten Hooven, F. C., & Thakur, M. P. (2022). Contrasting effects of soil microbial interactions on growth–defence relationships between early- and mid-successional plant communities. New Phytologist, 233(3), 1345-1357. https://doi.org/10.1111/nph.17609

Jassey, V. E. J., Walcker, R., Kardol, P., Geisen, S., Heger, T., Lamentowicz, M., Hamard, S., & Lara, E. (2022). Contribution of soil algae to the global carbon cycle. New Phytologist, 234(1), 64-76. https://doi.org/10.1111/nph.17950

Zaova, D., Cvetkoska, A., Wagner, B., Francke, A., Vogel, H., Levkov, Z., & Jovanovska, E. (2022). Diatom community responses to environmental change in Lake Ohrid (Balkan Peninsula) during the mid-Pleistocene Transition. Quaternary International, 622, 1-9. https://doi.org/10.1016/j.quaint.2022.03.002

Velthuis, M., Keuskamp, J., Bakker, E. S., Boersma, M., Sommer, U., van Donk, E., & van de Waal, D. B. (2022). Differential effects of elevated pCO2 and warming on marine phytoplankton stoichiometry. Limnology and Oceanography, 67(3), 598-607. https://doi.org/10.1002/lno.12020

Borer, E. T., Paseka, R., Peace, A., Asik, L., Everett, R., Frenken, T., González, A., Strauss, A. T., van de Waal, D. B., White, L. A., & Seabloom, E. W. (2022). Disease-mediated nutrient dynamics: Coupling host-pathogen interactions with ecosystem elements and energy. Ecological Monographs, in press. https://doi.org/10.1002/ecm.1510

Munthali, E., Marcé, R., & Farré, M. J. (2022). Drivers of variability in disinfection by-product formation potential in a chain of thermally stratified drinking water reservoirs. Environmental Science: Water Research & Technology, 8, 968-980. https://doi.org/10.1039/d1ew00788b

Kim, B., Westerhuis, J. A., Smilde, A. K., Floková, K., Suleiman, A. K. A., Kuramae, E., Bouwmeester, H. J., & Zancarini, A. (2022). Effect of strigolactones on recruitment of the rice root-associated microbiome. FEMS Microbiology Ecology, 98(2), 12. [fiac010]. https://doi.org/10.1093/femsec/fiac010

Zhao, Z., Gan, Y., He, H., Zhou, L., Li, K., Liu, Z., Wu, Q., & Su, Y. (2022). Effects of ancient allochthonous and contemporary autochthonous organic carbon on the growth and reproduction of lake zooplankton. Freshwater Biology, 67(5), 873-882. https://doi.org/10.1111/fwb.13887

Luo, Y., Chen, S., van Veelen, H. P. J., Sechi, V., ter Heijne, A., Veeken, A., Buisman, C. J. N., & Bezemer, T. M. (2022). Effects of sterilization and maturity of compost on soil bacterial and fungal communities and wheat growth. Geoderma, 409, [115598]. https://doi.org/0.1016/j.geoderma.2021.115598

Jovanovska, E., Hauffe, T., Stelbrink, B., Cvetkoska, A., Levkov, Z., Wagner, B., Lacey, J. H., Ognjanova-Rumenova, N., Hamilton, P. B., Brandenburg, K. M., Albrecht, C., & Wilke, T. (2022). Environmental filtering drives assembly of diatom communities over evolutionary time-scales. Global Ecology and Biogeography, 31(5), 954-967. https://doi.org/10.1111/geb.13471

Gawehns, F., Postuma, M., van Antro, M., Nunn, A., Sepers, B., Fatma, S., van Gurp, T. P., Wagemaker, N. C. A. M., Mateman, A. C., Milanovic-Ivanovic, S., Groβe, I., van Oers, K., Vergeer, P., & Verhoeven, K. J. F. (2022). epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS-based reduced representation bisulfite sequencing. Molecular Ecology Resources, In press. https://doi.org/10.1111/1755-0998.13597

Harvey, J. A. (2022). Evaluating the effects of the invasive cane toad (Rhinella marina) on island biodiversity, focusing on the Philippines. Pacific Conservation Biology.

Lemmen, K., Verhoeven, K., & Declerck, S. A. J. (2022). Experimental evidence of rapid heritable adaptation in the absence of initial standing genetic variation. Functional Ecology, 36(1), 226-238. https://doi.org/10.1111/1365-2435.13943

Díaz, A. S. L., Rizaludin, M. S., Zweers, H., Raaijmakers, J. M., & Garbeva, P. (2022). Exploring the Volatiles Released from Roots of Wild and Domesticated Tomato Plants under Insect Attack. Molecules, 27(5), [1612]. https://doi.org/10.3390/molecules27051612

Tomotani, B. M., Salvador, R. B., Sabadel, A. J. M., Miskelly, C. M., Brown, J. C. S., Delgado, J., Boussès, P., Cherel, Y., Waugh, S. M., & Bury, S. J. (2022). Extreme bill dimorphism leads to different but overlapping isotopic niches and similar trophic positions in sexes of the charismatic extinct huia. Oecologia, 198, 67–77. https://doi.org/10.1007/s00442-021-05082-8

Ode, P. J., Vyas, D. K., & Harvey, J. A. (2022). Extrinsic Inter- and Intraspecific Competition in Parasitoid Wasps. Annual Review of Entomology, 67, 305-328. https://doi.org/10.1146/annurev-ento-071421-073524

Momesso, L., Crusciol, C. A. C., Nascimento, C. A. C., Soratto, R. P., Canisares, L. P., Moretti, L. G., Rosolem, C. A., Trivelin, P. C. O., Kuramae, E., & Cantarella, H. (2022). Feasibility of early fertilization of maize with 15N application to preceding cover crop. European Journal of Agronomy, 135, [126485]. https://doi.org/10.1016/j.eja.2022.126485

Smulders, F. O. H., Becker, S. T., Campbell, J. E., Bakker, E. S., Boässon, M. J., Bouwmeester, M. M., Vonk, J. A., & Christianen, M. J. A. (2022). Fish grazing enhanced by nutrient enrichment may limit invasive seagrass expansion. Aquatic Botany, 176, [103464]. https://doi.org/10.1016/j.aquabot.2021.103464

Heinen, R., Thakur, M. P., Hiddes De Fries, J. R., Steinauer, K., Vandenbrande, S., Jongen, R., & Bezemer, T. M. (2022). Foliar herbivory on plants creates soil legacy effects that impact future insect herbivore growth via changes in plant community biomass allocation. Functional Ecology, 36(4), 1047-1062. https://doi.org/10.1111/1365-2435.14006

Momesso, L., Crusciol, C. A. C., Leite, M. F. A., Bossolani, J. W., & Kuramae, E. (2022). Forage grasses steer soil nitrogen processes, microbial populations, and microbiome composition in a long-term tropical agriculture system. Agriculture, Ecosystems and Environment, 323, [107688]. https://doi.org/10.1016/j.agee.2021.107688

Lembrechts, J. J., van den Hoogen, J., Aalto, J., Ashcroft, M. B., De Frenne, P., Kemppinen, J., Kopecký, M., Luoto, M., Maclean, I. M. D., Crowther, T. W., Bailey, J. J., Haesen, S., Klinges, D. H., Niittynen, P., Scheffers, B. R., Van Meerbeek, K., Aartsma, P., Abdalaze, O., Abedi, M.,... Lenoir, J. (2022). Global maps of soil temperature. Global Change Biology, 28(9), 3110-3144. https://doi.org/10.1111/gcb.16060

Temmink, R. J. M., van den Akker, M., van Leeuwen, C. H. A., Thöle, Y., Olff, H., Reijers, V. C., Weideveld, S. T. J., Robroek, B. J. M., Lamers, L. P. M., & Bakker, E. S. (2022). Herbivore exclusion and active planting stimulate reed marsh development on a newly constructed archipelago. Ecological Engineering, 175, [106474]. https://doi.org/10.1016/j.ecoleng.2021.106474

Bruijning, M., Fossen, E. I. F., Jongejans, E., Vanvelk, H., Raeymaekers, J. A. M., Govaert, L., Brans, K. I., Einum, S., & De Meester, L. (2022). Host–parasite dynamics shaped by temperature and genotype: Quantifying the role of underlying vital rates. Functional Ecology, 36(2), 485-499. https://doi.org/10.1111/1365-2435.13966

Jin, H., van Leeuwen, C. H. A., Van de Waal, D. B., & Bakker, E. S. (2022). Impacts of sediment resuspension on phytoplankton biomass production and trophic transfer: Implications for shallow lake restoration. Science of the Total Environment, 808, [152156]. https://doi.org/10.1016/j.scitotenv.2021.152156

Jin, H., van Leeuwen, C. H. A., Temmink, R. J. M., & Bakker, E. S. (2022). Impacts of shelter on the relative dominance of primary producers and trophic transfer efficiency in aquatic food webs: Implications for shallow lake restoration. Freshwater Biology, 67(6), 1107-1122. https://doi.org/10.1111/fwb.13904

Gutiérrez, R., Vargas, F. J. G., Lorenzo, J. A., & De Vries, P. (2022). Influx of Saharan species to Canary Islands after calima storm in February 2020. Dutchbirding, 44(1), 1-16.

Barrágan-Fonseca, K. Y., Nurfikari, A., van de Zande, E. M., Wantulla, M., van Loon, J. J. A., de Boer, W., & Dicke, M. (2022). Insect frass and exuviae to promote plant growth and health. Trends in Plant Science, In press. https://doi.org/10.1016/j.tplants.2022.01.007

Dominoni, D. M., de Jong, M., van Oers, K., O’Shaughnessy, P., Blackburn, G. J., Atema, E., Mateman, A. C., D’Amelio, P. B., Trost, L., Bellingham, M., Clark, J., Visser, M. E., & Helm, B. (2022). Integrated molecular and behavioural data reveal deep circadian disruption in response to artificial light at night in male Great tits (Parus major). Scientific Reports, 12(1), [1553]. https://doi.org/10.1038/s41598-022-05059-4

Zhang, W., & Declerck, S. A. J. (2022). Intrinsic postzygotic barriers constrain cross-fertilisation between two hybridising sibling rotifer species of the Brachionus calyciflorus species complex. Freshwater Biology, 67(2), 240-249. https://doi.org/10.1111/fwb.13727

Wilbers, G. J., de Bruin, K., Seifert-Dähnn, I., Lekkerkerk, W., Li, H., & Budding-Polo Ballinas, M. (2022). Investing in Urban Blue–Green Infrastructure—Assessing the Costs and Benefits of Stormwater Management in a Peri-Urban Catchment in Oslo, Norway. Sustainability (Switzerland), 14(3), [1934]. https://doi.org/10.3390/su14031934

Villar, N., Rocha-Mendes, F., Guevara, R., & Galetti, M. (2022). Large herbivore-palm interactions modulate the spatial structure of seedling communities and productivity in Neotropical forests. Perspectives in Ecology and Conservation, 20(1), 45-59. https://doi.org/10.1016/j.pecon.2021.10.005

Souza, Y., Villar, N., Zipparro, V., Nazareth, S., & Galetti, M. (2022). Large mammalian herbivores modulate plant growth form diversity in a tropical rainforest. Journal of Ecology, 110(4). https://doi.org/10.1111/1365-2745.13846

Leite, M. F. A. (2022). Lessons from the Amazon biome: impact of management practices on aboveground-belowground interactions (PhD Thesis). Utrecht University. https://doi.org/10.33540/820

Resch, M. C., Schütz, M., Ochoa-Hueso, R., Buchmann, N., Frey, B., Graf, U., van der Putten, W. H., Zimmermann, S., & Risch, A. C. (2022). Long-term recovery of above- and below-ground interactions in restored grasslands after topsoil removal and seed addition. Journal of Applied Ecology, In press. https://doi.org/10.1111/1365-2664.14145

Frauendorf, M., Allen, A. M., Jongejans, E., Ens, B. J., Teunissen, W., Kampichler, C., van Turnhout, C. A. M., Bailey, L. D., de Kroon, H., Cremer, J., Kleyheeg, E., Nienhuis, J., & van de Pol, M. (2022). Love thy neighbour?—Spatial variation in density dependence of nest survival in relation to predator community. Diversity and Distributions, 28(4), 624-635. https://doi.org/10.1111/ddi.13457

van Eekeren, N., Jongejans, E., van Agtmaal, M., Guo, Y., van der Velden, M., Versteeg, C., & Siepel, H. (2022). Microarthropod communities and their ecosystem services restore when permanent grassland with mowing or low-intensity grazing is installed. Agriculture, Ecosystems and Environment, 323, [107682]. https://doi.org/10.1016/j.agee.2021.107682

Breidenbach, A., Schleuss, P-M., Liu, S., Schneider, D., Dippold, M. A., de la Haye, T., Miehe, G., Heitkamp, F., Seeber, E., Mason-Jones, K. E., Xu, X., Huanming, Y., Dorij, T., Gube, M., Norf, H., Meier, J., Guggenberger, G., Kuzyakov, Y., & Spielvogel, S. (2022). Microbial functional changes mark irreversible course of Tibetan grassland degradation. Nature Communications, 13, [2681]. https://doi.org/10.1038/s41467-022-30047-7

Kuerban, M., Cong, W-F., Jing, J., & Bezemer, T. M. (2022). Microbial soil legacies of crops under different water and nitrogen levels determine succeeding crop performance. Plant and Soil, In press. https://doi.org/10.1007/s11104-022-05412-6

Mason-Jones, K. E., Robinson, S. L., Veen, G. F., Manzoni, S., & van der Putten, W. H. (2022). Microbial storage and its implications for soil ecology. ISME Journal, 16, 617–629. https://doi.org/10.1038/s41396-021-01110-w

Benti, G. M., Rybka, D., Klein Gunnewiek, P. J. A., Tessema, T., Raaijmakers, J. M., & Etalo, D. (2022). Molecular detection and quantification of the Striga seedbank in agricultural soils. Weed Research, In press. https://doi.org/10.1111/wre.12535

Peeters, E. T. H. M., Gerritsen, A. A. M., Seelen, L. M. S., Begheyn, M., Rienks, F., & Teurlincx, S. (2022). Monitoring biological water quality by volunteers complements professional assessments. PLoS One, 17(2), [e0263899]. https://doi.org/10.1371/journal.pone.0263899

Gómez-González, S., Paniw, M., Blanco-Pastor, J. L., García-Cervigón, A. I., Godoy, O., Herrera, J. M., Lara, A., Miranda, A., Ojeda, F., & Ochoa-Hueso, R. (2022). Moving towards the ecological intensification of tree plantations. Trends in Plant Science, In press. https://doi.org/10.1016/j.tplants.2021.12.009

Lindner, M., Gawehns, F., te Molder, S., Visser, M. E., van Oers, K., & Laine, V. N. (2022). Performance of methods to detect genetic variants from bisulphite sequencing data in a non-model species. Molecular Ecology Resources, 22(2), 834-846. https://doi.org/10.1111/1755-0998.13493

Trebuch, L. M. (2022). Photogranules for wastewater treatment: From community assembly to targeted microbial functions (PhD Thesis). Wageningen University. https://doi.org/10.18174/562026

Schulhof, M. A. S., van de Waal, D. B., Declerck, S. A. J., & Shurin, J. B. (2022). Phytoplankton functional composition determines limitation by nutrients and grazers across a lake productivity gradient. Ecosphere, 13(3), [e4008]. https://doi.org/10.1002/ecs2.4008

Maberly, S. C., van de Waal, D. B., & Raven, J. (2022). Phytoplankton Growth and Nutrients. In Reference Module in Earth Systems and Environmental Sciences Elsevier Inc.. https://doi.org/10.1016/B978-0-12-819166-8.00111-0

Stelzer, J. A. A., Mesman, J. P., Gsell, A., de Senerpont Domis, L., Visser, P. M., Adrian, R., & Ibelings, B. W. (2022). Phytoplankton responses to repeated pulse perturbations imposed on a trend of increasing eutrophication. Ecology and Evolution, 12(3), [e8675]. https://doi.org/10.1002/ece3.8675

Sueiro, R. A., Leiro, J. M., Blanco-Abad, V., Raaijmakers, J. M., de Bruijn, I., Dirks, R. P. H., & Lamas, J. (2022). Plant- and bacteria-derived compounds with anti-Philasterides dicentrarchi activity. Pathogens, 11(2), [267]. https://doi.org/10.3390/pathogens11020267

Ampt, E., van Ruijven, J., Zwart, M., Raaijmakers, J. M., Termorshuizen, A. J., & Mommer, L. (2022). Plant neighbours can make or break the disease transmission chain of a fungal root pathogen. New Phytologist, 233(3), 1303-1316. https://doi.org/10.1111/nph.17866

Eppinga, M. B., Van der Putten, W. H., & Bever, J. D. (2022). Plant-soil feedback as a driver of spatial structure in ecosystems: A commentary on “Belowground feedbacks as drivers of spatial self-organization and community assembly” by Inderjit, Ragan M. Callaway and Ehud Meron. Physics of Life Reviews, 40, 6-14. https://doi.org/10.1016/j.plrev.2022.01.001

Qi, Y., Ossowicki, A., Yergeau, É., Vigani, G., Geissen, V., & Garbeva, P. (2022). Plastic mulch film residues in agriculture: impact on soil suppressiveness, plant growth and microbial communities. FEMS Microbiology Ecology, 98(2), [fiac017]. https://doi.org/10.1093/femsec/fiac017

Boom, M. P., van der Jeugd, H. P., Steffani, B., Nolet, B. A., Larsson, K., & Eichhorn, G. (2022). Postnatal growth rate varies with latitude in range-expanding geese: The role of plasticity and day length. Journal of Animal Ecology, 91(2), 417-427. https://doi.org/10.1111/1365-2656.13638

Su, L., Qiu, P., Fang, Z., Sun, J., Mo, X., Liu, Y., Kuramae, E., Zhang, R., Shen, B., & Shen, Q. (2022). Potassium phosphite enhances the antagonistic capability of Bacillus amyloliquefaciens to manage tomato bacterial wilt. Plant Disease, 106(2). https://doi.org/10.1094/PDIS-08-21-1601-RE

Vaulot, D., Geisen, S., Mahé, F., & Bass, D. (2022). pr2-primers: An 18S rRNA primer database for protists. Molecular Ecology Resources, 22(1), 168-179. https://doi.org/10.1101/2021.01.04.425170, https://doi.org/10.1111/1755-0998.13465

Harvey, J. A. (2022). Prey availability affects developmental trade-offs and sexual-size dimorphism in the false widow spider, Steatoda grossa. Journal of Insect Physiology, 136, [104267]. https://doi.org/10.1016/j.jinsphys.2021.104267

Naguib, M., Titulaer, M., Waas, J. R., van Oers, K., Sprau, P., & Snijders, L. (2022). Prior territorial responses and home range size predict territory defense in radio-tagged great tits. Behavioral Ecology and Sociobiology, 76(3), [35]. https://doi.org/10.1007/s00265-022-03143-3

Fay, R., Authier, M., Hamel, S., Jenouvrier, S., van de Pol, M., Cam, E., Gaillard, J. M., Yoccoz, N. G., Acker, P., Allen, A., Aubry, L. M., Bonenfant, C., Caswell, H., Coste, C. F. D., Larue, B., Le Coeur, C., Gamelon, M., Macdonald, K. R., Moiron, M.,... Sæther, B. E. (2022). Quantifying fixed individual heterogeneity in demographic parameters: Performance of correlated random effects for Bernoulli variables. Methods in Ecology and Evolution, 13(1), 91-104. https://doi.org/10.1111/2041-210X.13728

Zhang, W., & Declerck, S. A. J. (2022). Reduced fertilization constitutes an important prezygotic reproductive barrier between two sibling species of the hybridizing Brachionus calyciflorus species complex. Hydrobiologia, 849, 1701–1711. https://doi.org/10.1007/s10750-022-04814-y

Thunnissen, N. W., de Waart, S. A., Collas, F. P. L., Jongejans, E., Hendriks, A. J., van der Velde, G., & Leuven, R. S. E. W. (2022). Risk screening and management of alien terrestrial planarians in The Netherlands. Management of Biological Invasions, 13(1), 81-100. https://doi.org/10.3391/mbi.2022.13.1.05

De Vries, E. H. J., Foppen, R. P. B., Van Der Jeugd, H., & Jongejans, E. (2022). Searching for the causes of decline in the Dutch population of European Turtle Doves (Streptopelia turtur). Ibis, 164(2), 552-573. https://doi.org/10.1111/ibi.13031

Alderliesten, J. B., Zwart, M. P., de Visser, J. A. G. M., Stegeman, A., & Fischer, E. A. J. (2022). Second compartment widens plasmid invasion conditions: Two-compartment pair-formation model of conjugation in the gut. Journal of Theoretical Biology, 533, [110937]. https://doi.org/10.1016/j.jtbi.2021.110937

Seelen, L. M. S., Teurlincx, S., Armstrong, M. R., Lürling, M., van Donk, E., & de Senerpont Domis, L. N. (2022). Serving many masters at once: a framework for assessing ecosystem services delivered by quarry lakes. Inland Waters, 12(1), 121-137. https://doi.org/10.1080/20442041.2021.1944765

Zhang, J., Ai, Z., Liu, H., Tang, D. W. S., Yang, X., Wang, G., Liu, Y., Liu, G., Morriën, E., & Xue, S. (2022). Short-term N addition in a Pinus tabuliformis plantation: Microbial community composition and interactions show different linkages with ecological stoichiometry. Applied Soil Ecology, 174, [104422]. https://doi.org/10.1016/j.apsoil.2022.104422

van Wijk, D., Teurlincx, S., Brederveld, R. J., de Klein, J. J. M., Janssen, A. B. G., Kramer, L., Van Gerven, L. P. A., Kroeze, C., & Mooij, W. M. (2022). Smart Nutrient Retention Networks: a novel approach for nutrient conservation through water quality management. Inland Waters, 12(1), 138-153. https://doi.org/10.1080/20442041.2020.1870852

Rowe, M., van Oort, A., Brouwer, L., Lifjeld, J. T., Webster, M. S., Welklin, J. F., & Baldassarre, D. T. (2022). Sperm Numbers as a Paternity Guard in a Wild Bird. Cells, 11(2), [231]. https://doi.org/10.3390/cells11020231

Yang, S., Poorter, L., Kuramae, E., Sass-Klaassen, U., Leite, M. F. A., Costa, O. Y. A., Kowalchuk, G., Cornelissen, J. H. C., Van Hal, J., Goudzwaard, L., Hefting, M. M., Van Logtestijn, R. S. P., & Sterck, F. J. (2022). Stem traits, compartments, and tree species affect fungal communities on decaying wood. Environmental Microbiology, in press. https://doi.org/10.1111/1462-2920.15953

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Harvey, J. A., Heinen, R., Gols, R., & Thakur, M. P. (2020). Climate change-mediated temperature extremes and insects: From outbreaks to breakdowns. Global Change Biology, 26(12), 6685-6701. https://doi.org/10.1111/gcb.15377

Thakur, M. P., Bakker, E. S., Veen, G. F., & Harvey, J. A. (2020). Climate Extremes, Rewilding, and the Role of Microhabitats. One Earth, 2(6), 506-509. https://doi.org/10.1016/j.oneear.2020.05.010

Thakur, M. P. (2020). Climate warming and trophic mismatches in terrestrial ecosystems: the green-brown imbalance hypothesis. Biology Letters, 16(2), [20190770]. https://doi.org/10.1098/rsbl.2019.0770

Lürling, M., Kang, L., Mucci, M., van Oosterhout, F., Noyma, N. P., Miranda, M., Huszar, V. L. M., Waajen, G., & Marinho, M. M. (2020). Coagulation and precipitation of cyanobacterial blooms. Ecological Engineering, 158, [106032]. https://doi.org/10.1016/j.ecoleng.2020.106032

Koorem, K., Snoek, B., Bloem, J., Geisen, S., Kostenko, O., Manrubia, M., Ramirez, K., Weser, C., Wilschut, R., & van der Putten, W. H. (2020). Community-level interactions between plants and soil biota during range expansion. Journal of Ecology, 108(5), 1860-1873. https://doi.org/10.1111/1365-2745.13409

Ramakers, J. J. C., Gienapp, P., & Visser, M. E. (2020). Comparing two measures of phenological synchrony in a predator–prey interaction: Simpler works better. Journal of Animal Ecology, 89(3), 745-756. https://doi.org/10.1111/1365-2656.13143

Moonga, H. B., Schoustra, S. E., van den Heuvel, J., Linnemann, A. R., Samad, M. S., Shindano, J., & Smid, E. J. (2020). Composition and Diversity of Natural Bacterial Communities in Mabisi, a Traditionally Fermented Milk. Frontiers in Microbiology, 11, [1816]. https://doi.org/10.3389/fmicb.2020.01816

Nuijten, R., Wood, K. A., Haitjema, T., Rees, E. C., & Nolet, B. A. (2020). Concurrent shifts in wintering distribution and phenology in migratory swans: individual and generational effects. Global Change Biology. https://doi.org/10.1111/gcb.15151

Pineda, A. M., Kaplan, I., Hannula, E., Ghanem, W., & Bezemer, T. M. (2020). Conditioning the soil microbiome through plant-soil feedbacks suppresses an aboveground insect pest. New Phytologist, 226(2), 595-608. https://doi.org/10.1111/nph.16385

Contreras-Dávila, C. A., Carrión, V. J., Vonk, V. R., Buisman, C. N. J., & Strik, D. P. B. T. B. (2020). Consecutive lactate formation and chain elongation to reduce exogenous chemicals input in repeated-batch food waste fermentation. Water Research, 169, [115215]. https://doi.org/10.1016/j.watres.2019.115215

Nolet, B. A., Schreven, K. H. T., Boom, M. P., & Lameris, T. (2020). Contrasting effects of the onset of spring on reproductive success of Arctic-nesting geese. Auk, 137(1,2), [ukz063]. https://doi.org/10.1093/auk/ukz063

Zheng, Y., Hu, X., Jia, Z., Bodelier, P., Guo, Z., Zhang, Y., Li, F., Li, X., & He, P. (2020). Co-occurrence patterns among prokaryotes across an age gradient in pit mud of Chinese strong-flavor liquor. Canadian Journal of Microbiology, 66(9), 495–504. https://doi.org/10.1139/cjm-2020-0012

Costa, O. Y. A., De Hollander, M., Pijl, A., Liu, B., & Kuramae, E. (2020). Cultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial polymer. Microbiome, in press, [76]. https://doi.org/10.1186/s40168-020-00836-7

van der Kolk, H., Krijgsveld, K. L., Linssen, H., Diertens, R. J., Dolman, D. D., Jans, M., Frauendorf, M., Ens, B. J., & Van de Pol, M. (2020). Cumulative energetic costs of military aircraft, recreational and natural disturbance in roosting shorebirds. Animal Conservation, 23(4), 359-372. https://doi.org/10.1111/acv.12546

Drost, S. M., Rutgers, M., Wouterse, M., De Boer, W., & Bodelier, P. (2020). Decomposition of mixtures of cover crop residues increases microbial functional diversity. Geoderma, 361, [114060]. https://doi.org/10.1016/j.geoderma.2019.114060

Wilke, T., Hauffe, T., Jovanovska, E., Cvetkoska, A., Donders, T., Ekschmitt, K., Francke, A., Lacey, J. H., Levkov, Z., Marshall, C. R., Neubauer, T. A., Silvestro, D., Stelbrink, B., Vogel, H., Albrecht, C., Holtvoeth, J., Krastel, S., Leicher, N., Leng, M. J.,... Wagner, B. (2020). Deep drilling reveals massive shifts in evolutionary dynamics after formation of ancient ecosystem. Science advances, 6(40), [eabb2943]. https://doi.org/10.1126/sciadv.abb2943

Sikkema, R. S., Schrama, M., Van Den Berg, T., Morren, J., Munger, E., Krol, L., Van DerBeek, J. G., Blom, R., Chestakova, I., Van Der Linden, A., Boter, M., Van Mastrigt, T., Molenkamp, R., Koenraadt, C. J. M., Van Den Brand, J. M. A., Munnink, B. B. O., Koopmans, M. P. G., & Van Der Jeugd, H. (2020). Detection of west nile virus in a common whitethroat (curruca communis) and culex mosquitoes in the Netherlands, 2020. Eurosurveillance, 25(40), 1-6. https://doi.org/10.2807/1560-7917.ES.2020.25.40.2001704

Sun, R., Gols, R., Harvey, J. A., Reichelt, M., Gershenzon, J., Pandit, S. S., & Vassão, D. G. (2020). Detoxification of plant defensive glucosinolates by an herbivorous caterpillar is beneficial to its endoparasitic wasp. Molecular Ecology, 29(20), 4014-4031. https://doi.org/10.1111/mec.15613

Chen, X., McGowan, S., Bu, Z-J., Yang, X-D., Cao, Y-M., Bai, X., Zeng, L-H., Liang, J., & Qiao, Q-L. (2020). Diatom-based water-table reconstruction in Sphagnum peatlands of northeastern China. Water Research, 174, [115648]. https://doi.org/10.1016/j.watres.2020.115648

Briddon, C. L., McGowan, S., Metcalfe, S. E., Panizzo, V., Lacey, J., Engels, S., Leng, M., Mills, K., Shafiq, M., & Idris, M. (2020). Diatoms in a sediment core from a flood pulse wetland in Malaysia record strong responses to human impacts and hydro-climate over the past 150 years. Geo: Geography and Environment, 7(1), e00090. https://doi.org/10.1002/geo2.90

Petruzzella, A., van Leeuwen, C. H. A., van Donk, E., & Bakker, E. S. (2020). Direct and indirect effects of native plants and herbivores on biotic resistance to alien aquatic plant invasions. Journal of Ecology, 108(4), 1487-1496. https://doi.org/10.1111/1365-2745.13380

Masteling, R., Voorhoeve, L., Ijsselmuiden, J., Dini-Andreote, F., De Boer, W., & Raaijmakers, J. M. (2020). DiSCount: computer vision for automated quantification of Striga seed germination. Plant Methods, 16(60). https://doi.org/10.1186/s13007-020-00602-8

Paseka, R., White, L., Van de Waal, D., Strauss, A., González, A., Everett, R., Peace, A., Seabloom, E. W., Frenken, T., & Borer, E. T. (2020). Disease-mediated ecosystem services: Pathogens, plants, and people. Trends in Ecology & Evolution, 35(8), 731-743. https://doi.org/10.1016/j.tree.2020.04.003

Essl, F., Dullinger, S., Genovesi, P., Hulme, P. E., Jeschke, J. M., Katsanevakis, S., Kühn, I., Lenzner, B., Pauchard, A., Pyšek, P., Rabitsch, W., Richardson, D. M., Seebens, H., van Kleunen, M., van der Putten, W. H., Vilà, M., & Bacher, S. (2020). Distinct Biogeographic Phenomena Require a Specific Terminology: A Reply to Wilson and Sagoff: Letter. BioScience, 70(2), 112-114. https://doi.org/10.1093/biosci/biz161

van Langevelde, F., Comor, V., de Bie, S., Prins, H. H. T., & Thakur, M. P. (2020). Disturbance regulates the density–body-mass relationship of soil fauna. Ecological Applications, 30(1), [e02019]. https://doi.org/10.1002/eap.2019

Zhang, L., Dumont, M. G., Bodelier, P. L. E., Adams, J. M., He, D., & Chu, H. (2020). DNA stable-isotope probing highlights the effects of temperature on functionally active methanotrophs in natural wetlands. Soil Biology & Biochemistry, 149, [107954]. https://doi.org/10.1016/j.soilbio.2020.107954

de Boer, J. G., Hollander, P. J., Heinen, D., Jagger, D., van Sliedregt, P., Salis, L., Kos, M., & Vet, L. E. M. (2020). Do plant volatiles confuse rather than guide foraging behavior of the aphid hyperparasitoid Dendrocerus aphidum? Chemoecology, 30(6), 315-325. https://doi.org/10.1007/s00049-020-00321-5

Kirchner, N., Cano-Prieto, C., van der Voort, M., Raaijmakers, J. M., & Gross, H. (2020). Draft Genome Sequence of Lipopeptide-Producing Strain Pseudomonas fluorescens DSM 11579 and Comparative Genomics with Pseudomonas sp. Strain SH-C52, a Closely Related Lipopeptide-Producing Strain. Microbiology Resource Announcements, 9(21), [00304-20]. https://doi.org/10.1128/MRA.00304-20

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Lourenço, K. S., Suleiman, A. K. A., Pijl, A., Cantarella, H., & Kuramae, E. (2020). Dynamics and resilience of soil mycobiome under multiple organic and inorganic pulse disturbances. Science of the Total Environment, 733(1 september), [139173]. https://doi.org/10.1016/j.scitotenv.2020.139173

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Lessons from the Amazon biome: impact of management practices on aboveground-belowground interactions

Linking microbial inoculants and associated changes in the soil microbiome to plant-soil performance in degraded lands

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