Stan Jonah Schouten

Dr. Stan Jonah Schouten

Postdoc
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Visiting Address

Droevendaalsesteeg 10
6708 PB Wageningen

+31 (0) 317 47 34 00

The Netherlands

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About

I am Stan Schouten, working on IJsselmeer water quality assessments and reconstructing background states for ecological restoration. I focus on longer timescales, which I tackle by using sedimentary records that are kept at lake bottoms.

Biography

I did my PhD at the University of Bern as a paleolimnologist focusing on eutrophication, anoxia, and rapid climate change throughout the Pleistocene and Holocene. Thereby working with pigments, key nutrients, redox indicators, paleoclimate and palaeoecological indicators. I am involved in the PaleoIMAGING working group pushing novel scanning techniques in paleoclimatology, ranging from CT-scanning of sediments, MALDI-MS scanning of sediment slabs, to hyperspectral imaging and micro-XRF measurements. I am interrested at longer timescales, and I am very passionate about the “Paleo” question, through the fantastic records that are kept at the dark cold, soft, muddy, lake bottoms. In general, I am interested in the interactions between sediment and freshwater.

CV

Employment

  • Present
    Postdoc
  • 2026
    Research assistant; University of Bern
  • 2022–2026
    PhD candidate; University of Bern
  • 2019–2021
    Waterambassadeur: Ministerie van IenW
  • 2017–2021
    Junior Teacher; Student Employee; Utrecht University
  • 2018–2020
    Producer; Upstream documentary
  • 2018
    Intern; Tanzania national parks

Education

  • 2022–2026
    PhD Climate Sciences; University of Bern
  • 2018–2021
    Masters Earth Surface and Water
  • 2015–2018
    Honours degree; Utrecht University
  • 2015–2018
    Bachelors Earth Sciences; Utrecht University
  • 2018
    Minor Arctic Geology; University Centre in Svalbard
  • 2014–2015
    Pre-trajectory music conservatory Drums; ArtEZ

Grants

  • 2026
    Best student presentation
    Budget: €200
    International paleolimnology association
  • 2024
    EGU best geosciences picture of the year 2024
    Budget: €450
    European Geosciences Union
  • 2025
    Travel Grant EGU25
    Budget: €1,000
    University of Bern; Faculty of Science

Publications

Key publications

  • Biogeosciences
    2026

    A high-resolution perspective on climate drivers of lake stratification and phototrophic community dynamics in Late Glacial Cent

    Zahajská, P., García, M. L., Birlo, S., Lami, A., Stebich, M., Schouten, S. J., ... & Grosjean, M.
    Predicting the trajectory of aquatic deoxygenation under global warming requires a mechanistic understanding of lacustrine responses to rapid climate shifts. We investigated how climate-driven changes in catchment vegetation and local iron-rich lithology regulated lake stratification and ecosystem resilience in the maar lake Holzmaar (Central Europe). We focused on the Late Glacial, specifically on transitions during Dansgaard-Oeschger Event 1 (DOE-1; ca. 14 690–11 700 cal yr BP), a period of rapid natural warming and cooling that serves as an analogue for future high amplitude climate variation and for modern Arctic lakes undergoing rapid climate-driven transitions. Combining non-destructive hyperspectral imaging (HSI) of sedimentary pigments with high-resolution XRF geochemistry, we resolved parts of the ecosystem trajectory during DOE-1. The primary producer community shifted from an oligotrophic cyanobacterial and low-light Pleniglacial assemblage to a stable, stratified Allerød assemblage, characterized by the planktonic diatom Stephanodiscus minutulus and anoxygenic purple sulphur bacteria (PSB) in the photic zone. While regional warming (mean summer temperature increased ∼ 2.8 °C) provided the physical potential for lake stratification, our data suggest that intense anoxia was primarily triggered by the expansion of Betula in the watershed. This afforestation stabilized the water column through wind shielding. The termination of the anoxic phase coincided with the onset of the Younger Dryas cooling and increased aridity, which effectively destabilized the existing stratification. While the shift from Betula to Pinus forest may have caused a change in the terrestrial-aquatic linkage, the primary driver of the transition was the physical forcing (lake mixing) of the climatic shift (cooling). Geochemically, the lake exhibited remarkable resilience. Unlike carbonate-dominated systems prone to internal phosphorus loading, Holzmaar efficiently sequesters nutrients via a dual mechanism of reactive iron binding (authigenic vivianite) and stable mineral burial. The phosphorus trap prevents nutrient release by permanently sequestering P in the sediment, allowing rapid ecosystem recovery without delay once the specific climate and vegetation drivers shift. Our findings demonstrate that in volcanic maar lakes, catchment vegetation characteristics and local lithology can modulate, and even override, the direct effects of climate warming on aquatic anoxia.
  • Palaeogeography, Palaeoclimatology, Palaeoecology
    2026

    Late Glacial temperature, anoxia, and primary production in Lago di Mezzano, Central Italy

    Schouten, S. J., Massaferro, J. I., Heiri, O., Hächler, L., Beffa, G., Lami, A., ... & Grosjean, M.
    In the North Atlantic domain, the Late Glacial period (19–11.8 cal ka BP) is characterized by rapid, high-amplitude climatic changes. The amplitude of temperature change in the Central Mediterranean region remains debated because reconstructions are limited and often contradictory. We present a chironomid-inferred temperature record from Lago di Mezzano, Central Italy, covering the Late Glacial. The chironomid record is contextualized with high-resolution multi-proxy data to elucidate the effects of changing primary production, sediment composition, and oxygen availability on chironomid assemblages. During the Oldest Dryas (>14.8 cal ka BP), reconstructed July air temperatures averaged ~12 °C. Temperatures increased in two steps, reaching ~16.8 °C (14.5–14.1 cal ka BP) and, finally, a plateau at ~17.5 °C during the Allerød and the Younger Dryas (13.9–12.0 cal ka BP). This warming is gradual and is paralleled by increasing primary production and the gradual extension of hypolimnetic anoxia. During the Younger Dryas, we observe low primary production, an increase in the siliciclastic fraction, and a shift in chironomid assemblages. This chironomid assemblage shift does not translate into significant summer cooling, suggesting that, while the Younger Dryas climatic reorganization affected catchment hydrology and erosion (Ti, K), the impact of the associated AMOC-slowdown on Central Italian summer temperatures was insignificant. Reconstructed absolute temperatures appeared “too cold” considering the geographical location of Mezzano. This discrepancy may stem from extensive cold, deep lake habitats in Mezzano and the edge effects of the applied transfer function. Habitat preferences of most chironomid taxa matched trophic and anoxic gradients during the Late Glacial.
  • Quaternary Science Reviews
    2026

    Climate-eutrophication-anoxia interactions in Late Glacial Soppensee, Switzerland: Forcings, non-linear responses and recovery

    Schouten S.J., Grosjean M., Zander P.D., Schmidhauser N.R.M.M., Tu L., Lami A., Vogel H., van Leeuwen J., Zahajská P.
    Combined effects of climate warming and anthropogenic nutrient loadings lead to lake eutrophication and anoxia globally. Because of chemical feedbacks, lakes under multiple stressors often respond in non-linear ways. However, it remains unclear whether climate change alone can lead to non-linear lake responses in the absence of anthropogenic nutrient disturbances. Here, we investigate the interactions between climate variability, nutrient cycling and trophic state changes, mixing regimes, anoxia and related chemical feedback in a small kettle-hole lake in Switzerland during Late Glacial times (15.2–12.6 cal ka BP), a period known for high-amplitude climate change in pre-anthropogenic times. After its formation during Heinrich Stadial 1 (>15 cal ka BP), Soppensee was oligotrophic and well-mixed. Soppensee became eutrophic and developed anoxia at 14.25 cal ka BP. Phosphorus (P) was released from sediments through the reductive dissolution of Fe-oxyhydroxides, fuelling eutrophication. Eutrophication lagged the Bølling warming (14.65 cal ka BP) by 400 years, suggesting that rising temperatures were not the trigger for eutrophication. Instead, eutrophication responded non-linearly to forest closure (threshold at 76 % arboreal pollen AP), which shielded Soppensee from wind mixing, enhancing lake stratification, anoxia and P release, intensifying eutrophication. These conditions ended during the 200-years cold period of the Aegelsee Oscillation (GI-1d, ca. 14.0 cal ka BP) when the landscape regionally opened (AP<76 %); the lake became well-mixed, oxygenated and P was efficiently sequestered. Throughout the Allerød (13.9–12.8 cal ka BP), enhanced Fe input prompted diagenetic vivianite formation, sequestering P in sediments, naturally remediating lake eutrophication despite closed forests, warm temperatures, lake stratification and anoxia.
  • Biogeosciences
    2025

    Lake anoxia, primary production and algal community shifts in response to rapid climate changes during the Late-Glacial.

    Schouten, S. J., Schmidhauser, N. R. M. M., Grosjean, M., Lami, A., Boltshauser-Kaltenrieder, P., ... & Zahajská, P.
    Lakes around the world are facing growing threats from climate change and human impacts. Rising temperatures and increased nutrient levels are causing eutrophication and deoxygenation, harming freshwater resources and the essential ecosystem services they provide. While modern impacts are well studied, knowledge on the responses of lake ecosystems to climate change in pre-anthropogenic times is still sparse. Current studies often rely on models or short observation time series, making it challenging to isolate the effects of warming from other factors. Lake sediments provide long-term records to study these effects in times prior to anthropogenic impact. We investigate the responses of aquatic primary production, lake stratification, and deoxygenation to rapid climate change during the Late Glacial (18–11 ka cal BP) using hyperspectral imaging, pigment extractions, XRF, and sequential extraction of redox-sensitive P, Mn, and Fe in a small kettle hole lake (Amsoldingersee, Switzerland). Our record reveals that ice cover was the primary driver of hypolimnetic anoxia, while the availability of nutrients determined the composition of algal communities. Four anoxic phases occurred in cold periods with prolonged ice cover: (i) Heinrich 1 (ca. 16.1 ka cal BP), (ii) the Aegelsee Oscillation, (iii) the Gerzensee Oscillation, and (iv) the Younger Dryas. Aquatic primary production and algal communities already responded to initial relatively weak warming during Heinrich 1 (16.1 ka cal BP) long before the rapid Bølling warming and synchronously to rapid climatic changes during Late Glacial times. Responses of the algal community to temperature were strongly modulated by nutrient limitations (P, N, and Si), which have varying importance over time, with dust and volcanic tephra (Laacher See) being major nutrient sources. Anoxic phases changed the algal communities, but these shifts were found to be reversible once the anoxia disappeared. Further, the sediments of Amsoldingersee provide a continuous record of atmospheric dust deposition (Ti, Zr, Si) covering the entire Late Glacial period. The similarity with the NGRIP dust record supports the view that the same large-scale atmospheric circulation regime controlled central Europe (Switzerland) and Greenland.
  • protocols.io
    2026

    Hands-On Operational Protocol of Hyperspectral Scanner Specim PFD-CL-65-V10E Operated by ChemaDAQ

    Petra Zahajská, Hanyu Xu, Stan Schouten, Noé Schmidhauser, Martin Grosjean
    This protocol provides a hands-on operational workflow for acquiring hyperspectral imaging (HSI) data using the Specim PFD-CL-65-V10E hyperspectral scanner operated through ChemaDAQ. It is designed for high-resolution sediment core scanning and outlines the complete acquisition procedure, including scanner preparation, calibration, scan configuration, white reference acquisition, data handling, and system shutdown.

Projects & collaborations

Collaborations

  • Advancing imaging methods for sedimentology; PaleoIMAGING

    2026–2030

    https://pastglobalchanges.org/paleoimaging

    Advanced biogeochemical imaging techniques now allow for high-resolution paleoclimate reconstructions from various environmental archives, resolving seasonal and annual changes. However, the community currently lacks standardized workflows to pursue best practices in analyzing and integrating the complex data from these methods. 

    Aligned with the PAGES mission, we aim to bridge this gap by developing a community benchmark workflow (toolbox) for data acquisition and postprocessing, and to align, combine, and interpret multi-proxy data from Micro-X-Ray Fluorescence (µXRF), Mass Spectrometry Imaging (MSI), Hyperspectral Imaging (HSI), and Micro-Computed Tomography (µCT). The µXRF scans provide high-resolution elemental mapping to study sediment provenance, ecosystem changes, and depositional conditions; MSI maps molecular distributions, including organic biomarkers used as environmental proxies such as for temperature or biomass burning, HSI maps organic (e.g., pigments) and inorganic (e.g., minerals) indicators through spectral signatures to trace productivity, redox conditions and sediment provenance, and finally, the µCT offers 3D visualization of density variations, revealing subtle features related to geohazards like volcanic eruptions, earthquakes and floods. The successful integration of these techniques will unlock unprecedented insights into past climate dynamics, geohazards, pollution history, and early anthropogenic impacts relevant to the PAGES mission and community. 

  • Younger Dryas working Group

    Present

    Compiling records of the Younger Dryas and reconstructing patterns and trends across this cooling phase in climate history.

Outreach